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RNA-Seq Expertise for Every Stage of Your Project

Zymo Services is a trusted NGS services partner supporting transcriptomic studies across any species. Our commitment to rigorous biosecurity standards, combined with a CAP-accredited/CLIA-certified laboratory for qualifying projects, helps researchers generate reliable data to advance scientific discovery.

End-to-End RNA-Seq Service
From sample preparation to publication-ready analysis across any organism.
Built for Challenging Samples
Reliable transcriptomic data from low-input (>20 ng) and FFPE.
Scientific Partnership
Collaborate with experienced scientists using validated workflows built for reproducibility and scalability.

Trusted by Leading Institutions

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RNA-Seq Services

Backed by Expert Scientists and Proven Workflows

Total RNA-Seq

Comprehensive transcriptome analysis of coding and non-coding RNA from low-input and degraded samples

3' mRNA-Seq

Differential gene expression (DGE) analysis of protein- coding transcripts

miRNA-Seq

Small RNA profiling for characterization of microRNAs supporting biomarker discovery

Metatranscriptomics

Gene expression profiling of microbial communities in complex environmental samples

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Explore Our Publication-Ready Analysis Reports

  • Total RNA-Seq
  • miRNA-Seq
  • Metatranscriptomic

Total RNA-Seq Analysis

Full Total RNA-Seq Analysis Includes:

  • Principal component analysis
  • Heatmap
  • Differential gene expression
  • Scatter plot
  • MA plot
  • Gene set enrichment analysis

miRNA-Seq Analysis

Full miRNA-Seq Analysis Includes:

  • miRNA Differential Expression
  • miRNA Heatmap
  • Scatter plot
  • MA plot
  • Contamination Check

Metatranscriptomic Analysis

Full Metatranscriptomic Analysis Includes:

  • Taxonomy Analysis
  • Functional Pathway Profiling
  • Antibiotic Resistance Profiling
  • Virulence Factor Profiling

Total RNA-Seq Introductory Offer

The more samples you submit, the more you save.

Available for first-time Total RNA-Seq customers​

$300 Off
Submit 15 or more samples
$600 Off
Submit 30 or more samples
$1000 Off
Submit 45 or more samples

Easily redeem your offer in 3 simple steps:

Create Portal Account

Sign up and set up profile

Choose Your Service

Select from Eligible Services

Apply Code & Save

Copy RNASEQ2026 

Create Portal Account

Sign up and set up profile

Choose Your Service

Select from Eligible Services

Apply Code & Save

Copy RNASEQ2026 

Terms & Conditions

Featured Technical Specification: Total RNA-Seq

Sequencing Platform Illumina NovaSeq X™, Element AVITI™
Read Length 2 x 150bp
Sequence Depth ~40 M read pairs (can be customized)
Sample Types RNA, Cells, Tissue, FFPE Tissue, Biofluids, Swabs
Organisms All (Human, Mouse, Plants, Insects, Bacteria, Fungi)
Input Requirements Total RNA input ≥ 20 ng
Library Prep Zymo-Seq RiboFree Total RNA Library Kit
Turnaround Time 20-30 business days
Data Visualization Sample similarity matrix, MDS plot, heatmap with top gene expression patterns, scatter plot, MA plot
Statistical Analysis Differential gene expression analysis with DESeq2 package, gene set enrichment analysis (if pathway annotation is available)

Need specifications for 3' mRNA-Seq, miRNA-Seq, or Metatranscriptomics? Submit an inquiry and our team can provide guidance.

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Frequently Asked Questions

Yes, Zymo Services supports low-input and FFPE-derived RNA using validated stranded total RNA-Seq workflows. Each sample undergoes quality assessment, and if quality concerns are identified, our team will review the results with you and discuss the best path forward.

Yes. Zymo Services offers a complete RNA-Seq workflow, from project consultation and sample stabilization to RNA extraction, library preparation, sequencing, and bioinformatic analysis. Providing consistent and high-quality results.

RNA samples can be shipped on dry ice or stabilized in DNA/RNA Shield and shipped at ambient temperature. Shipping instructions are provided after quote confirmation.

Total RNA-Seq captures both coding and non-coding RNA with coverage across entire transcripts. In contrast, 3’ mRNA-Seq focuses on the 3’ end of protein-coding transcripts for efficient gene expression quantification. The best approach depends on the study goal and desired data depth.

For a more detailed comparison, read our guide "Considerations for Choosing between Total RNA-Seq and 3’ mRNA-Seq."

Yes. CAP/CLIA RNA-Seq services are available for projects requiring testing in a certified laboratory. Contact our team to discuss your project requirements and determine the most appropriate workflow.

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